Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847174.1_cds_XP_016509936.1_22826
CDS Infomation

[gene=LOC107827349] [db_xref=GeneID:107827349] [protein=ankyrin repeat-containing protein At5g02620-like] [protein_id=XP_016509936.1] [location=join(112420..112876,115183..115592,116641..117501)] [gbkey=CDS]
Sequence

ATGGAGAAACAGATTAGCTTTCGTGGGGTGATGGAGAAACAGCAGAGTTTTCGAAACGGG
ACGATTGAGAAACAGAAGAGCTTTAGAGGGTTGATGGAAAAACAGAAAAGCTTTAGGATA
GCAATGGAGAGGCAGCTGAGCTTTGGTGGTGGTGAGAGGAAGAGGGGTAAGGAATCACCA
GGGAAAAGAGGAGATTCTCCACTTCACTTGGCAGTTAGAGCAGGGAACGTAGGGAAGGTG
AAAGAAATTGTTCAAAAGCTTGATAATAGCAAAGGCATCAGTGATTTGTTATCTAAGCAA
AACCAGGAGGGTGAGACTGCTCTGTACGTTGCGGCGGAGAATGGCCATACCTTGGTTGTT
GAAGAGTTGTTAAAACATTTAGACCTTCAGACGGCTTCTATTCTGGCGAGAAATGGTTAT
GATGCATTCCATGTTGCAGCAAAGCAGGGTCATATTGAGGTACTGAAGGAACTGTTGCAT
TCATTTCCAAACCTAGTGATGACAACAGATTCGTCTAATTCTACAGCCTTACATACAGCA
GCTGCTCAGGGGCACCTTGATGTAATGAATCTCCTTCTGGAGATTGACTCAAACCTTGCG
AAGATAGCTCGTAACAATGGCAAGACTATTCTTCATACAGCTGCAAGAATGGGACACTTG
GAAATAGTTAGATCTCTTCTAAGCAAAGATCCTGAGATTGGCTTTAGAACGGATAAAAAA
GGCCAAAGTGCCCTGCACATGTCTGTAAAGGGTCAAAATGTTGATATTGTGTTTGAATTA
ATCAAACCAAATCCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCACTTCAT
GTTGCAACTATAAAGGGACGGCCACAGATGGTACAATGTCTAATATCAATTGAGGGCATT
GATCTCAACGCCGTCAATAAGGCTGGAGAAACAGCTCTTGATATTGCAGAAAAGTCTGGA
TCTCTGCAGCTCGTTTCCATTTTAAAGGAGGCAGGAGCTACCCATTCTAAAGATCACGGG
AGGCCTCCCAATGCTGCGAAGCAACTCAAGCAGACTGTCAGTGACATAAGGCATGATGTG
GAGTCCCAACTCCAACACAGTCGTCAAACTGGCTTCAAAGTGCGGAAAATTGCAAAAAAT
GTGAAAAAACTCCACATTAGTGGTCTTAACAATGCCATCAACAACGCGACAGTTGTTGCT
GTCCTTATTGCTACTGTAGCTTTTGCTGCCATCTTCACTGTACCTGGCCAATACGTTGAG
GAAAAAACAGATGGGGTTTCACTCGGTGAAGCACACATAGCTAGGAAAGCGGCATTCATA
ATCTTCTTCTTGTTTGACAGTATGGCCTTGTTTATTTCCATTGCTGTTGTCGTAGTACAA
ACTTCTGTGGTGGTGATTGAACAAAAGGCAAAGAAGCAACTCATGTTTTGGATAAACAAG
CTCATGTGGGCAGCTTGCCTCTCTATTTCAATTTCCTTTATTTCACTCACATATGTGGTG
GTTGGAGACAAGGAAAAAGGGCTTGCTATCTATGCAACTGTCATTGGTAGCACCATAATG
CTCACTACTATTGGTTCCATGTGCTATTGTGTGGTTCGACATAGGCTAGAAGAGTCGAAG
ATGAGGAGCATAAGGAGGGCTGAGACTCATTCACGTTCATACTCGATGTCCGTGGCATCA
GATACAGAGCTTTACAGTGAAAGCTACAAGAGGATGTATGCAGTATAG

Peptide Sequence

PEP ID

XP_016509936.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tabacum]
Sequence

MEKQISFRGVMEKQQSFRNGTIEKQKSFRGLMEKQKSFRIAMERQLSFGGGERKRGKESP
GKRGDSPLHLAVRAGNVGKVKEIVQKLDNSKGISDLLSKQNQEGETALYVAAENGHTLVV
EELLKHLDLQTASILARNGYDAFHVAAKQGHIEVLKELLHSFPNLVMTTDSSNSTALHTA
AAQGHLDVMNLLLEIDSNLAKIARNNGKTILHTAARMGHLEIVRSLLSKDPEIGFRTDKK
GQSALHMSVKGQNVDIVFELIKPNPAVLALEDNKGNRALHVATIKGRPQMVQCLISIEGI
DLNAVNKAGETALDIAEKSGSLQLVSILKEAGATHSKDHGRPPNAAKQLKQTVSDIRHDV
ESQLQHSRQTGFKVRKIAKNVKKLHISGLNNAINNATVVAVLIATVAFAAIFTVPGQYVE
EKTDGVSLGEAHIARKAAFIIFFLFDSMALFISIAVVVVQTSVVVIEQKAKKQLMFWINK
LMWAACLSISISFISLTYVVVGDKEKGLAIYATVIGSTIMLTTIGSMCYCVVRHRLEESK
MRSIRRAETHSRSYSMSVASDTELYSESYKRMYAV

Transcript Sequence

Gene sequence data has not been registered.